PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT35584
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 170aa    MW: 20313 Da    PI: 4.6313
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT35584genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM82.49.2e-26131392128
       NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleev..ikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknr..atksgyWkatgkdkevlskkge 98 
               ppG+rF Ptdeel+++yL++kv+ +++++  +  i+  + y+  P+ L +++  +  ewyfF+++d+  + +  k +    + g+W+  gk+ ++++++g 
  OIT35584  13 PPGYRFVPTDEELIKYYLENKVHYQPFPALFIedIHAKEFYNKSPEALVENM-CSAGEWYFFIHQDEYFRGKIGKFQivGNEIGFWQCFGKEFPIYNSEGD 112
               9*************************7774323488889*********8544.3567*******9986654443333123569****************** PP

       NAM  99 lvglkktLvfykgrapkgektdWvmheyrl 128
               +vg k  + + +   ++++k +W+m+ yrl
  OIT35584 113 VVGFKINFKYCS---RSAKKNTWIMEKYRL 139
               **********94...445589*******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    
MATENDDLIT EFPPGYRFVP TDEELIKYYL ENKVHYQPFP ALFIEDIHAK EFYNKSPEAL  60
VENMCSAGEW YFFIHQDEYF RGKIGKFQIV GNEIGFWQCF GKEFPIYNSE GDVVGFKINF  120
KYCSRSAKKN TWIMEKYRLS FECAIDDEEI EEWVLGRIIR GQKKDYANYY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62380.14e-22NAC family protein