PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT35621
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family HD-ZIP
Protein Properties Length: 284aa    MW: 32035.5 Da    PI: 4.644
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT35621genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox65.38.1e-2164117356
               --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
  Homeobox   3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
               k++++t+eq++ Le+ Fe ++++  e++++LAkklgL+ rqV vWFqNrRa++k
  OIT35621  64 KKRRLTPEQVHLLEKSFETENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWK 117
               5678*************************************************9 PP
2HD-ZIP_I/II133.76.6e-4363154192
  HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 
                  ekkrrl+ eqv+lLE+sFe+e+kLeperK++la++LglqprqvavWFqnrRAR+ktk lE+dy++Lk++yd+l ++ ++++k++e+L++e+ 
     OIT35621  63 EKKRRLTPEQVHLLEKSFETENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWKTKTLERDYDQLKSSYDSLLSDFDSMRKDNEKLKAEVV 154
                  69**************************************************************************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    
MGSGHIFFDP SCHGNMLFLG NSDPVFRGPR SMMKMEDSSK RRPFFSSPEE LYDEEYYDEQ  60
SPEKKRRLTP EQVHLLEKSF ETENKLEPER KTQLAKKLGL QPRQVAVWFQ NRRARWKTKT  120
LERDYDQLKS SYDSLLSDFD SMRKDNEKLK AEVVSLMEKL QGKVVGGAGV SEKCEVLEVD  180
AMTLQVKVKA EDRLSSGSGG SAVVDEHSPQ LVDSGDSYFH NGHIEDYPVG PGGCNNIPPP  240
MDGLQSEEDD GSDDGGGHGY FSNVFVAAEE QQHEEGEPIG WFWS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01470.18e-79HD-ZIP family protein