PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT35816
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family B3
Protein Properties Length: 129aa    MW: 14991.8 Da    PI: 4.8063
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT35816genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B337.64e-1226106189
               EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
        B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 
               f+ v ++ ++ + + l++p+k   +h  +   +++  l + +g++W v +  + +++r  +++GWk Fv +n++k+g +v F+l++ s+
  OIT35816  26 FEVV-MTDSYINYDDLYIPRKIY-KHLPP---TVETALLHYRGKEWFVSM--SVGDRR-RFKEGWKLFVLDNNVKQGFVVKFTLVDVSS 106
               4444.5666666667*******9.66323...3579999***********..555444.4899********************987555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 129 aa     Download sequence    
DASHSTKRCL TYSCTSEDEE ENPPTFEVVM TDSYINYDDL YIPRKIYKHL PPTVETALLH  60
YRGKEWFVSM SVGDRRRFKE GWKLFVLDNN VKQGFVVKFT LVDVSSLYVD FNVEVKGEGT  120
HDCNPVEID
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06160.12e-08B3 family protein