PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT35903
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family MYB_related
Protein Properties Length: 148aa    MW: 16792.2 Da    PI: 10.3247
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT35903genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding41.33.5e-134993347
                     SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     +WT++E+ ll+++ + +G+g W++I + +   Rt+ q+ s+ qky
         OIT35903 49 AWTEDEQRLLLKGLEIHGKGKWAKIGKDLLPSRTPTQIASHAQKY 93
                     6***************************999*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 148 aa     Download sequence    
MGRNCTLCGR NGHNYRTCSE KSKTIKLFGV KISTSTKKDN GRKIKKGIAW TEDEQRLLLK  60
GLEIHGKGKW AKIGKDLLPS RTPTQIASHA QKYFMRLESA SNDRKSRKKP SVFDLHLEQE  120
TIVSEHDIKI VPLENQDQET ANSQVVCN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61620.17e-24MYB_related family protein