PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT35945
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 222aa    MW: 25725.2 Da    PI: 8.6718
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT35945genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM67.43.9e-21121393128
       NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykv.ePwdLpkkvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelv 100
               +G+rFhPt+ el+ ++Lk+ ++g++l+ e   ++ +diy    Pw++  + ++ eek  y F++ +k++++ +r +r+ ++ +Wk +    ++++ kg++v
  OIT35945  12 MGVRFHPTEAELI-NFLKRFLKGEPLPSECPnFQLADIYGDqPPWEIFGASDHpEEKVRYIFTRLKKQKSEHTRVRRTCANRTWKGQTGIDPIKNGKGTVV 111
               7************.9**********88755559999***87368***743333255566******************999*****888889****9***** PP

       NAM 101 glkktLvfykgrapkgektdWvmheyrl 128
               g ++ + f + +++  ++  W+m+ey++
  OIT35945 112 GFRRCFKFQTSSKEGEHNKIWLMKEYSV 139
               *********88888888999******86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    
MLTVPAARRR TMGVRFHPTE AELINFLKRF LKGEPLPSEC PNFQLADIYG DQPPWEIFGA  60
SDHPEEKVRY IFTRLKKQKS EHTRVRRTCA NRTWKGQTGI DPIKNGKGTV VGFRRCFKFQ  120
TSSKEGEHNK IWLMKEYSVG DDFCRENNIA KEDIVVCRIK KNIRSKKNHG VNMEEQDVPK  180
VIEAMLHGPD EDYCTTVQPA TICQAADQHQ VNDWSNYQQE VN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.19e-13NAC family protein