PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT36183
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 126aa    MW: 14355.8 Da    PI: 6.788
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT36183genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.51.9e-192273256
       AP2  2 gykGVrwdkkrgrWvAeIrdpseng..krkrfslgkfgtaeeAakaaiaarkklege 56
              +y+GVr+++ +g+++AeIrd       + +r++lg++ tae+Aa+a+++a+ +++g+
  OIT36183 22 KYRGVRRRP-WGKFAAEIRD----SarQGARVWLGTYNTAEDAARAYDRAAYSMRGH 73
              8********.**********....33334**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 126 aa     Download sequence    
MDEESSHGRK MDTKNGGGGE IKYRGVRRRP WGKFAAEIRD SARQGARVWL GTYNTAEDAA  60
RAYDRAAYSM RGHLAILNFP QEYNLPSSSS HFYTGSSSSR EVLEFECLDD KLLEELLDCD  120
EQNKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23220.15e-27ERF family protein