PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT36231

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

TALE

Protein Properties

Length: 643aa MW: 71715.1 Da PI: 8.1031

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT36231	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.9	2e-09	390	427	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LAk++gLt +qV++WF N R + OIT36231 390 FEHflHPYPKDSDKIMLAKQTGLTRSQVSNWFINARVR 427 554459******************************88 PP
2	BELL	114.3	6.4e-37	253	324	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 +rqe q+kkakL+++leeV++rY+qy++q+q+++s Fe+vag+gsak+Yt+lAl+aiS++FrcLkd i++qi OIT36231 253 QRQEFQMKKAKLVTMLEEVEQRYRQYRHQMQIIVSTFEQVAGIGSAKSYTQLALHAISKQFRCLKDTIVGQI 324 699*******************************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 643 aa Download sequence
MYYQGTSDNI HQATDGNIQT LYLMNPNYIH QGYTDTQQQQ QQQHHQQQII PHAPLQQAQQ 60 HFVGVPLPAV SLHDQNHAQL IHRLWNQSGS GGGNGNHHHQ YQIIPSSTVV SATSCGGTTT 120 DLASQLGFQR PITMLPTHQQ QQGSLSLSLS PQQQQISFNN ISAQNQVGSN INRGLDGISS 180 MVLGSKYLKA AQELLDEVVS VGKCIKGGEI EKEELINKES ILPLASDVNT STNSGGESSS 240 KQKYGVAELT TAQRQEFQMK KAKLVTMLEE VEQRYRQYRH QMQIIVSTFE QVAGIGSAKS 300 YTQLALHAIS KQFRCLKDTI VGQIKATRKS LGEEDQGVGG KIEGSRLKFV DHHLRQQRAL 360 QQLGMMQPNA WRPQRGLPER AVSVLRAWLF EHFLHPYPKD SDKIMLAKQT GLTRSQVSNW 420 FINARVRLWK PMVEEMYLEE VKNNQEQNSS LEENKNKNES NKEKMVSKSS APQENGTPTE 480 IATSTSSTSP TACGSFQAVQ AHNFSFLGSL NMENNTTAKK PRNHDMHNNS PSSILSSVDM 540 AETKARDHQS NKGFNPLMDA AAVYTMGEFG RFNPHEQMAA TNFHGNNGVS LTLGLPPNSE 600 NLSQQSYQNT IEFNRMSYEN IDFQNKRFPS QLLPDFVAGN LGT

Sequence ? help Back to Top

Protein Sequence Length: 643 aa Download sequence

MYYQGTSDNI HQATDGNIQT LYLMNPNYIH QGYTDTQQQQ QQQHHQQQII PHAPLQQAQQ  60
HFVGVPLPAV SLHDQNHAQL IHRLWNQSGS GGGNGNHHHQ YQIIPSSTVV SATSCGGTTT  120
DLASQLGFQR PITMLPTHQQ QQGSLSLSLS PQQQQISFNN ISAQNQVGSN INRGLDGISS  180
MVLGSKYLKA AQELLDEVVS VGKCIKGGEI EKEELINKES ILPLASDVNT STNSGGESSS  240
KQKYGVAELT TAQRQEFQMK KAKLVTMLEE VEQRYRQYRH QMQIIVSTFE QVAGIGSAKS  300
YTQLALHAIS KQFRCLKDTI VGQIKATRKS LGEEDQGVGG KIEGSRLKFV DHHLRQQRAL  360
QQLGMMQPNA WRPQRGLPER AVSVLRAWLF EHFLHPYPKD SDKIMLAKQT GLTRSQVSNW  420
FINARVRLWK PMVEEMYLEE VKNNQEQNSS LEENKNKNES NKEKMVSKSS APQENGTPTE  480
IATSTSSTSP TACGSFQAVQ AHNFSFLGSL NMENNTTAKK PRNHDMHNNS PSSILSSVDM  540
AETKARDHQS NKGFNPLMDA AAVYTMGEFG RFNPHEQMAA TNFHGNNGVS LTLGLPPNSE  600
NLSQQSYQNT IEFNRMSYEN IDFQNKRFPS QLLPDFVAGN LGT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35940.1	1e-92	TALE family protein

Link Out ? help Back to Top
Ensembl	OIT36231