PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT36366
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family B3
Protein Properties Length: 124aa    MW: 14129.9 Da    PI: 7.0558
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT36366genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3314.5e-1031109187
               EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
        B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 
               f+ v+t s v +++ l++p+k + +h ++++   +  + + +g++W v++  + ++++  ++ GW+ Fv +n +  g +v F+l++ 
  OIT36366  31 FEVVMTDSCVDNHD-LYIPRKIC-KH-LPPTL--EHAFLHHRGKEWYVNM--SVGDQK-RFKVGWRLFVLENFISRGFVVKFTLVDA 109
               66677666666666.********.66.33444..6889999*********..555444.4899********************9764 PP
Sequence ? help Back to Top
Protein Sequence    Length: 124 aa     Download sequence    
STKRAISYSS TSSDAYSSTS SDNEEENPPT FEVVMTDSCV DNHDLYIPRK ICKHLPPTLE  60
HAFLHHRGKE WYVNMSVGDQ KRFKVGWRLF VLENFISRGF VVKFTLVDAS LLRAIFNVDV  120
KGDG