PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT36398

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

G2-like

Protein Properties

Length: 186aa MW: 21393 Da PI: 7.4555

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT36398	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	99.2	2.9e-31	27	79	2	54
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYR 54 prlrWtpeLH+ F+eave+LGGs+kAtPk+i ++m vkgL ++hvkSHLQ+YR OIT36398 27 PRLRWTPELHQLFIEAVEHLGGSDKATPKRIQQMMAVKGLKISHVKSHLQMYR 79 8**************************************************** PP
2	Myb_DNA-binding	52.7	1e-16	28	79	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e+++l+++av+ lGg t+k+I ++m kg+ ++ks++q+y+ OIT36398 28 RLRWTPELHQLFIEAVEHLGGSdkaTPKRIQQMMAvKGLKISHVKSHLQMYR 79 89****************99**************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 186 aa Download sequence
MMEFSIMKNS CSQKISRVRQ YKKSSVPRLR WTPELHQLFI EAVEHLGGSD KATPKRIQQM 60 MAVKGLKISH VKSHLQMYRN LKERASINVI RSSSPQKIEP GSQFSYKAGV NEYSDQITEN 120 IYCYNYQEAQ GSLTSGMTKE EEDGECEREI NFLPNLDDYQ NSQSDNSTKD NSHINLDLSI 180 SSCFYC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	1e-27	G2-like family protein

Link Out ? help Back to Top
Ensembl	OIT36398