PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT36421

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

Dof

Protein Properties

Length: 238aa MW: 27356.8 Da PI: 6.9537

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT36421	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	112.7	1.6e-35	7	63	3	59
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknk 59 + lkcprC+stntkfCyynny+ sqPr+fCk+C+r+Wt+GG lrnvPvGggr+ ++ OIT36421 7 AEPLKCPRCESTNTKFCYYNNYNKSQPRHFCKGCKRHWTEGGILRNVPVGGGRKIKR 63 6789************************************************87665 PP

Sequence ? help Back to Top
Protein Sequence Length: 238 aa Download sequence
MGENTKAEPL KCPRCESTNT KFCYYNNYNK SQPRHFCKGC KRHWTEGGIL RNVPVGGGRK 60 IKRLKITSEK SNSQIVVEDE KKNVFDNLYH EPNIPSSSLP HDTITNNLCC SNFPKIQSYS 120 CQTLKKCTTF ERSDTHPATF LKRPSNIVKT CVPQDEDMLL SLSFDKIPCS IPTSTNQYSN 180 IYNYMENLDS TKEEPANTWQ GPGTSSLMME NMQSYWNWND IEALDDLNIL WDDTEIKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07640.1	2e-29	Dof family protein

Link Out ? help Back to Top
Ensembl	OIT36421