PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT36427
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family MYB_related
Protein Properties Length: 98aa    MW: 11470.7 Da    PI: 8.8142
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT36427genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.91.2e-08652347
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47
                      WT +  +l+ +a + +  +   +W+  a+ +g g++++++k ++ k+
         OIT36427  6 TWTHQQNKLFENALAIYDREtpdRWRNLAKAVG-GKSEEEVKRHYEKL 52
                     7*****************88*************.***********987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 98 aa     Download sequence    
MASNSTWTHQ QNKLFENALA IYDRETPDRW RNLAKAVGGK SEEEVKRHYE KLVEDIKHIE  60
SGNVALPNYN KANNGGHSNY KGYNFMDEEQ RLKYLKLQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75250.13e-33MYB_related family protein