PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT36519
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NF-YB
Protein Properties Length: 165aa    MW: 17784.8 Da    PI: 5.3356
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT36519genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB176.82.1e-5527122297
     NF-YB   2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 
               reqdr+lPian++rimkk+lPan+ki+kd+k+tvqecvsefisf+tseasdkcq+ekrktingddll alatlGfedy++plkvyl++yre+eg+ 
  OIT36519  27 REQDRYLPIANIGRIMKKALPANGKIAKDSKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLSALATLGFEDYIQPLKVYLARYREMEGDA 122
               89********************************************************************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 165 aa     Download sequence    
MAEPASPGGG GGSHESGGER SPQSNLREQD RYLPIANIGR IMKKALPANG KIAKDSKDTV  60
QECVSEFISF ITSEASDKCQ KEKRKTINGD DLLSALATLG FEDYIQPLKV YLARYREMEG  120
DAKGSARVGD ASVRKDIVGS QLGSNTQFVY EGSFAQGLDY GNSQI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53340.12e-72NF-YB family protein