PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT36645
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family B3
Protein Properties Length: 80aa    MW: 9121.86 Da    PI: 9.6603
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT36645genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B338.12.7e-1222763189
              .--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
        B3 31 eesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89
              +   +++l + +g++W+v+l  + + +r  l +GWk+Fv +n+Lk g +++F+l++ ++
  OIT36645 22 PILAKIML-QCNGKEWDVTL--TSGVRR-RLVNGWKQFVVDNNLKKGSIFLFELVQATS 76
              45555665.459********..444444.4889********************998744 PP
Sequence ? help Back to Top
Protein Sequence    Length: 80 aa     Download sequence    
EPYLYIMFLQ FLPKSICGYL PPILAKIMLQ CNGKEWDVTL TSGVRRRLVN GWKQFVVDNN  60
LKKGSIFLFE LVQATSGAVI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.18e-08B3 family protein