PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT36831
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family B3
Protein Properties Length: 107aa    MW: 12897.8 Da    PI: 5.9767
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT36831genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B335.51.8e-11586290
              EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
        B3  2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90
              f vl++ ++ k++ + +pk f e+      es   t+ + +g+ W +++  + ++++ ++++GWk Fv  n++k g  + F l++ +ef
  OIT36831  5 FEVLMKDSYIKQDYMHIPKYFYEHLP----ESHSTTVLHYDGEPWFMEI--NMGKRG-WFKDGWKYFVMNNNIKRGWLINFDLVEITEF 86
              468899999*************5554....23357888999********..666655.79*********************98765555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 107 aa     Download sequence    
MNPSFEVLMK DSYIKQDYMH IPKYFYEHLP ESHSTTVLHY DGEPWFMEIN MGKRGWFKDG  60
WKYFVMNNNI KRGWLINFDL VEITEFCVIF QLHVTGRGTL QDPVEIN