PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT37060
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family GATA
Protein Properties Length: 180aa    MW: 19854.2 Da    PI: 10.0692
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT37060genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA60.32.5e-194175135
      GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
              C+ CgttkTplWR gp g+k+LCnaCG++ rkk++
  OIT37060 41 CVDCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRR 75
              ********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    
MVDFSDKVSD HEVAENEEMS GQNQTPERVL SENSESQLKT CVDCGTTKTP LWRGGPAGPK  60
SLCNACGIRS RKKRRALLGL NKEDKKPKKS MGSSNKSISQ HHNQNNQSSN SSTSSSEEST  120
TSNAVKNNKC IPFKKRLLHF GREVALQRPR SSSTQHRRKL GEEEQAAFLL MALSCGSVYA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06740.19e-36GATA family protein