PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT37251

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

NAC

Protein Properties

Length: 416aa MW: 47138.2 Da PI: 7.2302

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT37251	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	162.9	1.2e-50	45	170	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvgl 102 +pGfrFhPt+eelv +yL++kvegk++++ e i+ +d+y+++Pw+Lp+ ++ +ekewyf+++rd+ky++g+r+nr+t+sgyWkatg d+ + s++++ +gl OIT37251 45 MPGFRFHPTEEELVEFYLRRKVEGKRFNV-ELITFLDLYRYDPWELPALAAIGEKEWYFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRSENSRSIGL 144 79*************************.89***********8778899******************************************* PP NAM 103 kktLvfykgrapkgektdWvmheyrl 128 kktLvfy+g+apkg +t+W+m+eyrl OIT37251 145 KKTLVFYSGKAPKGIRTSWIMNEYRL 170 **********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 416 aa Download sequence
MAIVPFTSII MSQSQQHEQQ DDTINNINNT IKDDDDDDHE HDMVMPGFRF HPTEEELVEF 60 YLRRKVEGKR FNVELITFLD LYRYDPWELP ALAAIGEKEW YFYVPRDRKY RNGDRPNRVT 120 TSGYWKATGA DRMIRSENSR SIGLKKTLVF YSGKAPKGIR TSWIMNEYRL PQHETERLQK 180 AEISLCRVHK RSGVEDHPSL PRSLPTTRAS SSSSSRGTTN SIKKQHHQQV VQNSLISPYV 240 VGQSSHQQQI DEKLSTETSA SSTSTDHHHH HHVATSLGLN SLSNSYNSIA LDPMARGTAT 300 SASLTTSSSL SPFASFVSPS STGAVVDDLH KLINLDQQVV FHNQNFNNNP INHIPAVSSQ 360 QFLQPQVLPQ HAQPQSLLFQ GSLQSSSSSF SDRLWDWSSI QTDANCKDYQ PNNPFK

Sequence ? help Back to Top

Protein Sequence Length: 416 aa Download sequence

MAIVPFTSII MSQSQQHEQQ DDTINNINNT IKDDDDDDHE HDMVMPGFRF HPTEEELVEF  60
YLRRKVEGKR FNVELITFLD LYRYDPWELP ALAAIGEKEW YFYVPRDRKY RNGDRPNRVT  120
TSGYWKATGA DRMIRSENSR SIGLKKTLVF YSGKAPKGIR TSWIMNEYRL PQHETERLQK  180
AEISLCRVHK RSGVEDHPSL PRSLPTTRAS SSSSSRGTTN SIKKQHHQQV VQNSLISPYV  240
VGQSSHQQQI DEKLSTETSA SSTSTDHHHH HHVATSLGLN SLSNSYNSIA LDPMARGTAT  300
SASLTTSSSL SPFASFVSPS STGAVVDDLH KLINLDQQVV FHNQNFNNNP INHIPAVSSQ  360
QFLQPQVLPQ HAQPQSLLFQ GSLQSSSSSF SDRLWDWSSI QTDANCKDYQ PNNPFK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02450.1	1e-110	NAC family protein

Link Out ? help Back to Top
Ensembl	OIT37251