PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT37288
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family WRKY
Protein Properties Length: 165aa    MW: 19001.6 Da    PI: 9.9282
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT37288genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY77.12e-2488149159
               ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
      WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
               +dDg+ WrKYGqK++ ++++pr+YY+Ct +   gC++ k+v+r + +p  + ++Y+g+H+++
  OIT37288  88 VDDGHVWRKYGQKQILDAPYPRHYYKCTNKfdqGCEAIKQVQRIQANPPQFRTIYQGHHTCK 149
               59**************************99999***************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 165 aa     Download sequence    
MLAENLVGQI MGSFCKTLSI LKSNNSNEDS QIPVVDVFPC RKDDRTSPED STGSCKKSSS  60
KERRGYNKKR YFNRKILAKS IKETSTLVDD GHVWRKYGQK QILDAPYPRH YYKCTNKFDQ  120
GCEAIKQVQR IQANPPQFRT IYQGHHTCKT YPTVSQMLLD SSNRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.19e-26WRKY family protein