PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT37340
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family GATA
Protein Properties Length: 343aa    MW: 37545.1 Da    PI: 6.6222
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT37340genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA57.22.3e-18243276134
      GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
               C++C  tkTp+WR gp g+ktLCnaCG++y++ +
  OIT37340 243 CQHCEITKTPQWRAGPMGPKTLCNACGVRYKSGR 276
               *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 343 aa     Download sequence    
MASNLVDEID CGSFFDHIDD LIDFPLENET AGLNSTDCKD FPSIWNDPLP DSDSLFSGSH  60
RNSASDFSAE LSVPYEDIVQ LEWLSTFVED SFSGGGLTLG KETFPLNKET SEAKFQTSSP  120
VSVLESSSSS SSSSCSVEKT VPLSSPCHRG PQRARSKRPR PATFNPAPVI QLISPTSSFT  180
EIPHPFVAQG IASESENFAE SPMKKILKPA VAEQKKKKKL KLSFPSARVE ANQNPVAQTI  240
RKCQHCEITK TPQWRAGPMG PKTLCNACGV RYKSGRLFPE YRPAASPTFV PSIHSNSHKK  300
VIEMRTKVVP DNNANIARTA PPATVTQPEF NPSNKESVEE ENK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1157161KRPRP
2215222KKKKKLKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54810.24e-40GATA family protein