PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT37495
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 231aa    MW: 24946.1 Da    PI: 9.6023
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT37495genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.79.4e-212675255
       AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
              +y+GVr ++ +gr++AeIrdp   gk+ r++lg+f+taeeAaka++ a+++++g
  OIT37495 26 HYRGVRKRP-WGRYAAEIRDP---GKKSRVWLGTFDTAEEAAKAYDTAAREFRG 75
              69*******.**********8...557*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    
MAVKNKVSNG DLKGGNVKTN GVKEIHYRGV RKRPWGRYAA EIRDPGKKSR VWLGTFDTAE  60
EAAKAYDTAA REFRGPKAKT NFSLPSENQS PSHSSTVESS SGETGVHAPQ HAPLELDLTR  120
RLGSMAADGG DNCRRAGEVG CPIFHQQPTV AVLPNGQPVL LFDSLWRPGV VNRPQPYHVT  180
PMAMGFNGVN AGVGPTVSDS SSVVDKNQYD GKRGIDLDLN LAYGILMLTM M
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.15e-27ERF family protein