PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT37603
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 242aa    MW: 27890.1 Da    PI: 6.8885
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT37603genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP238.62.7e-12107148351
       AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 
                +GV++  k+ +W A I++      +k+++lg+ gt eeAa+++++a+ 
  OIT37603 107 MRGVYF--KNMKWQAAIKVD-----KKQIHLGTVGTQEEAARLYDRAAF 148
               79**98..47*********4.....5********************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
MVSIRRRKLL GLCSGRSSFL VPLPKFSENG HIAENRFLNN KHTSVHPMPS TDIDESKERT  60
AVKVVPGSSN GHASGSLIEQ TAQQFPEVKR RKRHRRKHFE NQEPCLMRGV YFKNMKWQAA  120
IKVDKKQIHL GTVGTQEEAA RLYDRAAFMC GREPNFEISE EEKQELRQFK WDEFLAFTRS  180
AITNKKTRRR SGVGARRKSE PLSSTLNSEE EEEEEEEEDE EGEPESNSFS ASEDIEQDLS  240
LY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.11e-47ERF family protein