PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT37814
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 245aa    MW: 28406.4 Da    PI: 9.5848
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT37814genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM147.37.8e-46141381128
       NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelv 100
               lppGfrF+Pt+ee+v +yL +k+ + +l++ ++i+e++i+k++PwdLp  +   e++ yfFs+++ ky++g+r+nrat  gyWk tg dk+++++ ++   
  OIT37814  14 LPPGFRFQPTEEEIVFQYLIRKTFSCPLPA-SIIPEINICKHDPWDLPGDI---EQDRYFFSNKEAKYRNGNRSNRATLGGYWKPTGLDKQITCSkRKPIL 110
               79****************************.89***************554...5689***********************************98345559 PP

       NAM 101 glkktLvfykgrapkgektdWvmheyrl 128
               g+kktLvfykg+++++++tdW+mheyrl
  OIT37814 111 GMKKTLVFYKGKSSHASRTDWIMHEYRL 138
               **************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    
MDKFNFVKDG AIKLPPGFRF QPTEEEIVFQ YLIRKTFSCP LPASIIPEIN ICKHDPWDLP  60
GDIEQDRYFF SNKEAKYRNG NRSNRATLGG YWKPTGLDKQ ITCSKRKPIL GMKKTLVFYK  120
GKSSHASRTD WIMHEYRLVL PKNQPFNFHH FKKSSQSSMV QIGNWVLCHI FMKKRNGKCD  180
KKEYKADHQH VQIPKQTLYY DFMREDLSDR AISSCSSSLS NDDSSEVSSN PSGLVEHEEA  240
SNRAL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.19e-75NAC family protein