PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT37905

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

NAC

Protein Properties

Length: 346aa MW: 40014.8 Da PI: 5.5242

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT37905	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	176.6	7.1e-55	11	140	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 +ppGfrFhPtdeelv +yL+kk +++k++l +vik++d+y++ePwdL+ k ++e++ewyfFs++dkky+tg+r+nrat +g+Wkatg+dk+v++ k++ OIT37905 11 VPPGFRFHPTDEELVGYYLRKKFAAQKIDL-DVIKDIDLYRIEPWDLQdKcrIGYEEQNEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKAVYD-KSK 109 69**************************.9***********943432233667**********************************.999 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrle 129 l+g++ktLvfy+grap+g+k+dW+mheyrle OIT37905 110 LIGMRKTLVFYRGRAPNGQKSDWIMHEYRLE 140 ***************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 346 aa Download sequence
MMDTNESSSC VPPGFRFHPT DEELVGYYLR KKFAAQKIDL DVIKDIDLYR IEPWDLQDKC 60 RIGYEEQNEW YFFSHKDKKY PTGTRTNRAT MAGFWKATGR DKAVYDKSKL IGMRKTLVFY 120 RGRAPNGQKS DWIMHEYRLE SEENSPTQEE GWVVCRAFKK RNTGQPKINI GEGWESNYFC 180 EESSGVSSVV DPLEYIPRQP PPRNFMSQNL LCKQEIEANN NSSLNFLHSD QFIQLPQLES 240 PSLPLMKRPS SMSLVSENNR DEDDQQITKR SKINKNVNDR VTDWRALDKF VAYQLSHDDG 300 VSSYEPHNGS DLGMLLLQSG REEGPMLDDL LSSTSNRDIG ICIFDK

Sequence ? help Back to Top

Protein Sequence Length: 346 aa Download sequence

MMDTNESSSC VPPGFRFHPT DEELVGYYLR KKFAAQKIDL DVIKDIDLYR IEPWDLQDKC  60
RIGYEEQNEW YFFSHKDKKY PTGTRTNRAT MAGFWKATGR DKAVYDKSKL IGMRKTLVFY  120
RGRAPNGQKS DWIMHEYRLE SEENSPTQEE GWVVCRAFKK RNTGQPKINI GEGWESNYFC  180
EESSGVSSVV DPLEYIPRQP PPRNFMSQNL LCKQEIEANN NSSLNFLHSD QFIQLPQLES  240
PSLPLMKRPS SMSLVSENNR DEDDQQITKR SKINKNVNDR VTDWRALDKF VAYQLSHDDG  300
VSSYEPHNGS DLGMLLLQSG REEGPMLDDL LSSTSNRDIG ICIFDK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G18060.1	1e-133	NAC family protein

Link Out ? help Back to Top
Ensembl	OIT37905