PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT38075
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family Dof
Protein Properties Length: 356aa    MW: 38552.2 Da    PI: 8.3976
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT38075genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof124.63.1e-392786362
    zf-Dof  3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
              e +l+cprCds ntkfCyynnyslsqPr+fCk+CrryWtkGGalrnvP+Ggg+rknkk +
  OIT38075 27 EPSLNCPRCDSPNTKFCYYNNYSLSQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKKIK 86
              56789****************************************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 356 aa     Download sequence    
MTSPDNKEES QSSGGGGRKT SAARPQEPSL NCPRCDSPNT KFCYYNNYSL SQPRHFCKTC  60
RRYWTKGGAL RNVPIGGGCR KNKKIKTSSS SRLSGDSKDT SVSSDIGGLK FFHGLSPAMD  120
FQLGGLNFPR LSSNTSTSGS IFNQFSSFGD ISTTSAAAIG SSSCFNLDPS GSCSGSLLGF  180
NNFPFSSSML KQGNAGVQEM GSMGVHHGTM ASSIESLSSI NQDLHWKLQQ QRLAMLFGGD  240
QNQKENIVSS HVPRLDQNQI QKPQPILFQN LDISSKQQEE EAAVYGNNIN SRKDHGSGSD  300
HGNNNLATEW FFDNSFGTVN PTSTNSSSGN ANDQNNNNNW NSIQAWSNLN QYSTLP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65590.16e-56Dof family protein