PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT38191
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ZF-HD
Protein Properties Length: 210aa    MW: 24020.4 Da    PI: 9.2281
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT38191genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer75.57.7e-241060458
  ZF-HD_dimer  4 vrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58
                 v+Y eC++N Aas+ g+a+DGCgEf+p+    g +++l CaAC+CHRnFHR+ ++
     OIT38191 10 VKYGECMHNYAASTMGYALDGCGEFCPN----GIPESLICAACNCHRNFHRKMEV 60
                 79*************************9....889****************9865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    
MASSNKHFLV KYGECMHNYA ASTMGYALDG CGEFCPNGIP ESLICAACNC HRNFHRKMEV  60
EVEVETEVEL SILSNSHHNR GTSLVIVVPP TPTYQQQSRI HPRQKYDKNN NVAATPPQRA  120
ETATEMGGRE IEVAEQMSTK RKRINSEQKE RVKAFAEKIG WRWTKYNKEV KPFCAEIGIT  180
PYFLKNWIDN NRRRFGPKKT IKLEKEGTVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24660.12e-26ZF-HD family protein