PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT38194
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ZF-HD
Protein Properties Length: 189aa    MW: 20922.3 Da    PI: 7.9711
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT38194genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer67.22.9e-211061456
  ZF-HD_dimer  4 vrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRre 56
                 +rY eClkNh  + G + +DGC+Ef++s ge+gt+ +  Ca CgC R+FHR +
     OIT38194 10 IRYGECLKNHSKKHGHYLFDGCREFVKS-GEDGTKGSYICANCGCIRSFHRMN 61
                 79*************************9.999*******************75 PP
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    
MASNSSSTPI RYGECLKNHS KKHGHYLFDG CREFVKSGED GTKGSYICAN CGCIRSFHRM  60
NNLPLHRHQA MRLCFFHHCV IPNGMQPIFH PFMATAGETQ VSVSAASLPV TITSNPESVS  120
VQENVPYVMT PPMLPLFPLF PKDEMGPVPV PLPLFPETPS SVPDVPKCKK YEFLIGICDR  180
SGGVELMRV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28917.13e-16ZF-HD family protein