PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT38287
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family B3
Protein Properties Length: 94aa    MW: 10821.8 Da    PI: 10.1085
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT38287genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3345.3e-1115801890
              --HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
        B3 18 lpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90
              lpk+ +   g+ ++ s++ +l+  +g++W ++l  + + +r  l +GWk+Fv +n+Lk + ++ F+l++ +++
  OIT38287 15 LPKSIC---GYLPPISVKTMLR-YNGKEWAMTL--TSGVRR-RLVNGWKQFVVDNNLKKRNVLHFELVQATSG 80
              566666...4455667666655.59********..444444.4889*********************998777 PP
Sequence ? help Back to Top
Protein Sequence    Length: 94 aa     Download sequence    
MNPEPYLYIM FLQFLPKSIC GYLPPISVKT MLRYNGKEWA MTLTSGVRRR LVNGWKQFVV  60
DNNLKKRNVL HFELVQATSG VVIFSVEELG LTNA