PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT38510
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family MYB_related
Protein Properties Length: 87aa    MW: 9740.92 Da    PI: 9.7866
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT38510genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding28.92.6e-091155244
                     SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44
                     g+WT    + + +a + + ++   +W+ +a+ +g g+t++++k ++
         OIT38510 11 GSWTVKQNKAFEKALAVYDKDtcdRWSNVAKAVG-GKTAEEVKRHY 55
                     89********************************.**********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 87 aa     Download sequence    
MSSMSSQHGS GSWTVKQNKA FEKALAVYDK DTCDRWSNVA KAVGGKTAEE VKRHYEILVQ  60
DVLYIESGRV PFPKYKTTTR GSHTTSQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75250.21e-35MYB_related family protein