PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT38545
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 89aa    MW: 10010.2 Da    PI: 7.5427
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT38545genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP224.66.3e-081738224
       AP2  2 gykGVrwdkkrgrWvAeIrdpse 24
              +y+GVr+ + +g+++AeIrdp+ 
  OIT38545 17 HYRGVRQSP-WGKFAAEIRDPNR 38
              8*******9.**********733 PP
Sequence ? help Back to Top
Protein Sequence    Length: 89 aa     Download sequence    
MKQVQNVEIS NDTEKKHYRG VRQSPWGKFA AEIRDPNRKG NQDEDERVLP TPAAAPLTPS  60
SWSATWDSGD GKGIFEVPPL SPLWPILRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47230.11e-12ERF family protein