PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT39129
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 214aa    MW: 23797.8 Da    PI: 9.0368
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT39129genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.31e-19555155
       AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
              +++kGVr++  +g+Wv+eIr+p        kr++lg+f taeeAa+a+++a+  ++g
  OIT39129  5 KKFKGVRQRQ-WGSWVSEIRHP-----LlkKRIWLGTFETAEEAARAYDEAAILMNG 55
              59*****999.**********8.....335**********************98876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    
MVQSKKFKGV RQRQWGSWVS EIRHPLLKKR IWLGTFETAE EAARAYDEAA ILMNGQVAKT  60
NFPIVKENDV NNSNDKKFPL SSASTLSTVL NAKLRKCCKD PAPSMTCLRL DNDNCHIGVW  120
QKRSGKNSGS NWITKVELGK KEEPHQSHES MNSWSLSSSS GSTSSSSSSE LGINKPLDEE  180
NRAAMQMVEE LLNCNSPFSS APINDLSPSF SNFK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25390.25e-62ERF family protein