PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT39183

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

Dof

Protein Properties

Length: 398aa MW: 43990.3 Da PI: 8.4089

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT39183	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	117.2	6.5e-37	51	110	2	61
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 ++k+l+cprC+st+tkfCyynn +++qPr+fC++C+ryWt+GG++rn+PvG+grrknk+ OIT39183 51 PDKILPCPRCNSTDTKFCYYNNNNVNQPRHFCRSCQRYWTAGGTMRNLPVGAGRRKNKNL 110 7899*****************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 398 aa Download sequence
MMEISENPKT SSGSEKSTKS PTDEDHQTVR SSETENEPNT TDSQQTLLKK PDKILPCPRC 60 NSTDTKFCYY NNNNVNQPRH FCRSCQRYWT AGGTMRNLPV GAGRRKNKNL ASHYHHISIP 120 DDVLLASRIE SPNGFHHPMF KPNGTVLSFG PELPLCDSMA SALNPAERRA PNVIPNGFYK 180 QEHRNSSCKG GENGVDCSKG SSIKTSSMMV EGGNIKPHEA VMRNTNGFPS PAPCLHGVPF 240 PFPWNAAVPM SAIYPFGFPM PFYPAPYWNC SVPPWTNPWL SQPSRTENEK VSGSDPNSPL 300 GKHSREGDDP EGKEPVEQKS SKRSILVPKT LRIDDPDEAA KSSIWSTLGI KYDSASRGGF 360 FKALQPKIDD KDHKDTTSPV LHANPAALSR SLVLQERT

Sequence ? help Back to Top

Protein Sequence Length: 398 aa Download sequence

MMEISENPKT SSGSEKSTKS PTDEDHQTVR SSETENEPNT TDSQQTLLKK PDKILPCPRC  60
NSTDTKFCYY NNNNVNQPRH FCRSCQRYWT AGGTMRNLPV GAGRRKNKNL ASHYHHISIP  120
DDVLLASRIE SPNGFHHPMF KPNGTVLSFG PELPLCDSMA SALNPAERRA PNVIPNGFYK  180
QEHRNSSCKG GENGVDCSKG SSIKTSSMMV EGGNIKPHEA VMRNTNGFPS PAPCLHGVPF  240
PFPWNAAVPM SAIYPFGFPM PFYPAPYWNC SVPPWTNPWL SQPSRTENEK VSGSDPNSPL  300
GKHSREGDDP EGKEPVEQKS SKRSILVPKT LRIDDPDEAA KSSIWSTLGI KYDSASRGGF  360
FKALQPKIDD KDHKDTTSPV LHANPAALSR SLVLQERT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47500.1	5e-81	Dof family protein

Link Out ? help Back to Top
Ensembl	OIT39183