PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT39212
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 135aa    MW: 15201.5 Da    PI: 11.3075
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT39212genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2569.6e-184393155
       AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
              + y+GVr +  + +Wv+e+r+ps+   +kr++lg++ tae+Aa+a++ a+++l+g
  OIT39212 43 PVYRGVRKRN-NDKWVCELREPST---QKRIWLGSYPTAEMAARAHDIAALALRG 93
              68*****888.8*********965...4*************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 135 aa     Download sequence    
MNNSSSSSHV RVAVSDEEDI NILALRKPKK RAGRKKFKET RHPVYRGVRK RNNDKWVCEL  60
REPSTQKRIW LGSYPTAEMA ARAHDIAALA LRGPLATLNF ADSAWRLPVP VSKDPKDLRH  120
AAAKAAEPLL VRRGN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12610.13e-36ERF family protein