PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT39677
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 225aa    MW: 24655.2 Da    PI: 7.0175
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT39677genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.87.4e-202876355
       AP2  3 ykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
              ++GVr ++ +gr++AeIrd ++    ++r++lg+f++ae+Aa+a++aa+++l+g
  OIT39677 28 FRGVRKRP-WGRFAAEIRDpWK----KTRVWLGTFDSAEDAARAYDAAARALRG 76
              8*******.**********883....5*************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    
MRRGTAAAAP APVAGEPNGS GGSKEIRFRG VRKRPWGRFA AEIRDPWKKT RVWLGTFDSA  60
EDAARAYDAA ARALRGPKAK TNFPLPYAHH HQFNQGLNPN NDPFVDSRFY PQDNPIISQR  120
PTSSSMSSTV ESFSGPRPPP APRQQTTASY RKYPRSPPVV PDDCHSDCDS SSSVVDDGDC  180
EKENDNDNDN IASSSFRKPL LFDLNLPPPM DDAGADDLHC TALCL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50640.15e-24ERF family protein