PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT39749
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bHLH
Protein Properties Length: 254aa    MW: 28774.3 Da    PI: 6.5116
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT39749genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.42.5e-1377129155
               CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
       HLH   1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
               ++ +hn+ Er RR++iNs ++ Lr+ll   +   ++kKls  ++  ++ +YI +Lq
  OIT39749  77 KKLNHNASERDRRKKINSLYSSLRSLLTAsD---HKKKLSIPSTISRVLKYIPELQ 129
               6789*************************55...8888***************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    
MLAISSPPLF SDHFCWLLED PISHHFINTA AETSDNSAAA LHSSSSSSSS QTKHCDSNKF  60
DQINNGEHVH QPDQMVKKLN HNASERDRRK KINSLYSSLR SLLTASDHKK KLSIPSTISR  120
VLKYIPELQN EVERLIEKKE ELTARTISNK ENSADFNKQK RRGNESSSLV ISASEIGDKE  180
VVIHISTLKI NKRSFAEAVS ELEDEGLFLL NSSCIETFED RVFHTLHFQV EGTMVVELDM  240
LRDKLSSCFE KEDK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.17e-49bHLH family protein