PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT39905
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ZF-HD
Protein Properties Length: 257aa    MW: 28569.6 Da    PI: 7.4111
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT39905genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer104.85.4e-3352109260
  ZF-HD_dimer   2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreveee 60 
                  ++vrY+eClkNhA+ +GghavDGCg+fmp+ geegt++alkCaAC+CHRnFHR+eve e
     OIT39905  52 SGVRYRECLKNHAVGIGGHAVDGCGDFMPA-GEEGTMDALKCAACNCHRNFHRKEVEGE 109
                  679**************************9.999*********************9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    
MEFDEEHEEQ EEEIGNIHQI SSAAATINFQ TQGNNSVRGG VEEGVSTTVR KSGVRYRECL  60
KNHAVGIGGH AVDGCGDFMP AGEEGTMDAL KCAACNCHRN FHRKEVEGEV FHHTPPPHLT  120
HHHPQPHHSH HPQFSPYTSY RTPHHPSGYL HVNPPPHQRP LALPSTSRED EDMSNPSSSG  180
GGGGGSGGVG GSSRKRFRTK FTADQKDKML AFAERLGWRM QKQDEALVQQ FCAETNVQRH  240
VFKVWMHNNK HTLGKKP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24660.15e-68ZF-HD family protein