PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT40069
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 191aa    MW: 21841.6 Da    PI: 5.1382
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT40069genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.61.8e-1954103355
       AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
               y+GVr+++ +g+++AeIrd s+++ + r++lg+f+ta+eAa a+++a+  l+g
  OIT40069  54 YRGVRRRP-WGKYAAEIRD-STRN-SVRVWLGTFDTAKEAALAYDQAAFTLHG 103
               9*******.**********.3433.6*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    
MDYSQYNHLG FNENDTEDML LLNVLSEAGE NSFNNNLHVN KQETHSKENE GANYRGVRRR  60
PWGKYAAEIR DSTRNSVRVW LGTFDTAKEA ALAYDQAAFT LHGTMAVLNF PVDIVYQSLM  120
EMECGFEEGC SPVLILKKMH SMKKGKNNIH RKKKEKEMSF ENVLVLEDLG ADYLEEILRL  180
SEGCCDPSMS F
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1151156RKKKEK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.17e-56ERF family protein