PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT40193

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

NAC

Protein Properties

Length: 398aa MW: 45114.9 Da PI: 6.5455

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT40193	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	166.3	1.1e-51	15	144	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk....kvka..eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 +ppGfrFhPt+eel+++yL+kkv+ +k++l +vi++vd++k+ePwd+++ + +++wyfFs++dkky+tg+r+nrat++g+Wkatg+dk ++s OIT40193 15 VPPGFRFHPTEEELLHYYLRKKVACEKIDL-DVIRDVDLNKLEPWDIQEkcriG--GstPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKVIHS- 111 69**************************.9***********9534332..222556********************************99. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 + + +g++ktLvfykgrap+g+k+dW+mheyrl OIT40193 112 NCKRIGMRKTLVFYKGRAPHGQKSDWIMHEYRL 144 8889*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 398 aa Download sequence
MSKDMNLSVN GQSQVPPGFR FHPTEEELLH YYLRKKVACE KIDLDVIRDV DLNKLEPWDI 60 QEKCRIGGST PQNDWYFFSH KDKKYPTGTR TNRATAAGFW KATGRDKVIH SNCKRIGMRK 120 TLVFYKGRAP HGQKSDWIMH EYRLDDNMTN PQDAVNASES SSPEEGWVVC RVFKKKNYHK 180 ALESPHQSSS AVSIMNSRTL IQKPNNDGVL DQILMYMGRS SCKQQDHENK HSINLVNNIN 240 NIHLDDHHMQ INSTSSYINT NSSNGTTFLH LPALENHHSP TTNMDDDVSS LQLIQQDCSF 300 GHENMLTETE PTSGAGPSDW VALDRLVASQ LNGHVETSNN LYFPLHNNGL QLRTNGRPND 360 EDDAFSQSQA AHEDDVEFWS YARSSSSSPS DPLCHLSV

Sequence ? help Back to Top

Protein Sequence Length: 398 aa Download sequence

MSKDMNLSVN GQSQVPPGFR FHPTEEELLH YYLRKKVACE KIDLDVIRDV DLNKLEPWDI  60
QEKCRIGGST PQNDWYFFSH KDKKYPTGTR TNRATAAGFW KATGRDKVIH SNCKRIGMRK  120
TLVFYKGRAP HGQKSDWIMH EYRLDDNMTN PQDAVNASES SSPEEGWVVC RVFKKKNYHK  180
ALESPHQSSS AVSIMNSRTL IQKPNNDGVL DQILMYMGRS SCKQQDHENK HSINLVNNIN  240
NIHLDDHHMQ INSTSSYINT NSSNGTTFLH LPALENHHSP TTNMDDDVSS LQLIQQDCSF  300
GHENMLTETE PTSGAGPSDW VALDRLVASQ LNGHVETSNN LYFPLHNNGL QLRTNGRPND  360
EDDAFSQSQA AHEDDVEFWS YARSSSSSPS DPLCHLSV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46770.1	1e-107	NAC family protein

Link Out ? help Back to Top
Ensembl	OIT40193