PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT40455
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bHLH
Protein Properties Length: 92aa    MW: 10458.8 Da    PI: 8.5214
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT40455genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH20.96.4e-0720591554
              HHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
       HLH 15 riNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
              +i + +++L++llP+ +   +  K s + +L+++++YI++L
  OIT40455 20 QIIELMSKLQQLLPEiR-TRRTNKASASKVLQETCNYIRNL 59
              6667899********77.56666799999**********99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 92 aa     Download sequence    
MSGRRSRQSS EGTSRISDDQ IIELMSKLQQ LLPEIRTRRT NKASASKVLQ ETCNYIRNLH  60
REVDDLSDRL SQLLSTIDAD SPEAAIIRSL LM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28857.12e-35bHLH family protein