PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT40540
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family B3
Protein Properties Length: 132aa    MW: 14932.3 Da    PI: 4.397
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT40540genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B337.35e-12511063896
               EEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
        B3  38 ledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
               + + +g++W++ +  ++  +r +++ GWk Fv++n+Lk gD +vF+l + s++++++kv
  OIT40540  51 VLTCRGKKWDMFC--SGDNQRRFMQ-GWKIFVNDNNLKIGDGLVFELLECSRAKMTFKV 106
               45669********..6666665566.********************7644555554443 PP
Sequence ? help Back to Top
Protein Sequence    Length: 132 aa     Download sequence    
MAGSEDEDIS PLCGKPYFDF ILGQSNLEPK YLMFLPAKIW PELAPGEVPV VLTCRGKKWD  60
MFCSGDNQRR FMQGWKIFVN DNNLKIGDGL VFELLECSRA KMTFKVQILR GDFPAELITE  120
PEDGTAENPI VL