PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT40618
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NF-YB
Protein Properties Length: 179aa    MW: 20124.4 Da    PI: 4.7591
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT40618genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB422.2e-1326120796
     NF-YB   7 flPianvsrimkkvlP...anakis..kdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 
                lP + v r++k  l    +++ is  +d+     e +  fi ++++ a+d c++ kr+tin++d++ al ++ f +++epl++ l+ +r+ +++
  OIT40618  26 GLPKTIVRRLVKDKLSqlsTDTDISllRDSLLAFSESARIFIHYLSATANDICKESKRQTINAEDVFKALEEIEFPEFIEPLRASLEVFRQRNSK 120
               5777778888887654111566666446777788999*****************************************************97765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    
MAEIEKQKDK EKEKLPAATV QIEQEGLPKT IVRRLVKDKL SQLSTDTDIS LLRDSLLAFS  60
ESARIFIHYL SATANDICKE SKRQTINAED VFKALEEIEF PEFIEPLRAS LEVFRQRNSK  120
RKSGSSKSTE SNKKAKLKEP VENGKGKMKE QPSDTENEDG QAAEQPSDNE DEDGQAEGP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G27470.13e-29NF-YB family protein