PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT40736
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bHLH
Protein Properties Length: 331aa    MW: 37255.8 Da    PI: 4.6154
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT40736genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH309.6e-10148191755
               HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
       HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
               + Er+RR r+++++  Lr+l+P+      +Kl+Ka++   A+ Y++ Lq
  OIT40736 148 ISERKRRGRMKEKLYALRSLVPNI-----TKLDKASVIGDAILYVQRLQ 191
               67*********************7.....7******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    
MESANAYSKM PMENVNDVGL INFIDEENFD QFIELIRGET ADPIVTFCPN NDYEHITGCF  60
SEANVQFEPA STDFFDWNAT NMSDPISLYA SLPNEMKLSK EEEEGEEEDN DFDESSATTT  120
TTTTTTRTVS PATPTKKSTR TDRSRTLISE RKRRGRMKEK LYALRSLVPN ITKLDKASVI  180
GDAILYVQRL QTEAKKLKIE VEGLESSLNG MNDNKGGAFQ NAKKMNSTSY YPAIKKISKM  240
DVFQVEEKGF YVRLVCNKGR HVAASLFKAL DSLTGFYIQS SNLATSSDDY ILTFTLNVRE  300
YEVDINFGNL KLWIASAFLN QGFDFVTSPL A
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28160.15e-72bHLH family protein