PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT40747
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family WRKY
Protein Properties Length: 239aa    MW: 27144.6 Da    PI: 7.558
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT40747genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.31e-30127186159
               ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
      WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
               ++Dgy+WrKYGqK+ ++++ pr+YY+C++a +Cpvkkkv+rs edp+v++ tYegeHnh+
  OIT40747 127 VKDGYHWRKYGQKVTRDNPSPRAYYKCSFApSCPVKKKVQRSVEDPSVLVATYEGEHNHP 186
               58***************************99****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 239 aa     Download sequence    
MDTSSGDKSF TIDLNTNPSL QTINRIPHEM LDEELIRMKE ENKKLTTMLT TLCENYKSMH  60
THLIELLQKH NSVEDNSKLL SRKRKAEDDH YCCANSEEAS PKRPREIRTN VSTVCVKTTP  120
SDQSAVVKDG YHWRKYGQKV TRDNPSPRAY YKCSFAPSCP VKKKVQRSVE DPSVLVATYE  180
GEHNHPLPSQ AQVTVPLINQ NVTTYLNKFM EDIDTTSLQQ DLVAQMAHSL TTNPSFTAA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80840.11e-62WRKY family protein