PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIV89153
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family M-type_MADS
Protein Properties Length: 178aa    MW: 20222.2 Da    PI: 7.7668
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIV89153genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF60.71.7e-191157349
              --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
    SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
               enks r +tfsk + g++KKA ELS+LC++ev v++fs  gk y +
  OIV89153 11 MENKSSRLITFSKHKSGLFKKAMELSILCGVEVVVLLFSVGGKAYSF 57
              69*****************************************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    
MSHRKIEMKW MENKSSRLIT FSKHKSGLFK KAMELSILCG VEVVVLLFSV GGKAYSFGHP  60
SIEAMTKKFL HQGEGSHVSH GESSNDDDNI GKLSQQLQEL KDQIQVEKDK KKDLDKALSK  120
YKFIRGKLPI DNLSFEELVE FKASWVVVQD NMSESNNELE AASSLLLLRE NRMFETGI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34440.12e-22M-type_MADS family protein