PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV89167

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 293aa MW: 32417.4 Da PI: 8.2257

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV89167	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.2	0.00057	104	126	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+k+F++ L H +H OIV89167 104 YQCKTCNKCFPSFQALGGHRASH 126 9***********99999998887 PP
2	zf-C2H2	12.5	0.00045	194	216	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C++Cg Fs+ L H+r+H OIV89167 194 HDCSICGAEFSSGQALGGHMRRH 216 56********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 293 aa Download sequence
MNVEEEVLVP KDQMQIMKGK RTERQRLPSP LQVAAPSSTS CSGGIGRDQT TMSNTNLIDQ 60 FRHRTQEDDE DMANCLILLA QGKVSHSQPP PDHKNNNNSE LYLYQCKTCN KCFPSFQALG 120 GHRASHKKPN KANTIGAEKK QVVTTFMKEE DHDHYDSNKT NTTLSMPRPN RPLSLYRSIT 180 SGTTIAATTK SRVHDCSICG AEFSSGQALG GHMRRHRTSI NTSITTVSVS DGNFIVGGGG 240 SPEYQETKKP RTVLKLDLNL PAPDDDNIES MFTFQTKESV IVFSAPSLVN CHY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04390.1	4e-38	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIV89167