PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV89304

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 294aa MW: 33149.3 Da PI: 8.3269

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV89304	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.9	0.00033	4	26	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC+ C++sFs+ L H++ H OIV89304 4 HKCKLCSRSFSNGRALGGHMKAH 26 79******************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 294 aa Download sequence
MEIHKCKLCS RSFSNGRALG GHMKAHLATL PIPPKPQTFQ HPFESASFSY QSQPSQEEEQ 60 HVVESHEKAM SYGLRGNPKR SLRYSYPEFS FNNNGFVAQD RESESESKKP TGQRSKRNRK 120 SRLYKGLEQE PKMFKPSFLE SPPLSSVSDF SPEEDVAMCL MMLSRDKWES NLVFEGEGNQ 180 VTEAEEEIKL KKRIGVKNEC ENCGKKFRSF RALGSHRSIC CSDKRSDKIF ECPFCFKVFG 240 SGQALGGHKR SHLMQNSSST SIANSKKESF LDLNLPAPIE GEDDLSIVSD VSNA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60580.1	6e-44	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIV89304