PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV89446

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 389aa MW: 44854.7 Da PI: 6.2446

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV89446	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	10.7	0.0017	4	26	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC+ C ++Fs+ L H+r+H OIV89446 4 HKCKLCLRRFSNGRALGGHMRSH 26 79********************9 PP
2	zf-C2H2	13.5	0.00022	254	276	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ykC+ C+k+F++ L H +H OIV89446 254 YKCETCNKVFRSYQALGGHRASH 276 9***********99999998887 PP

Sequence ? help Back to Top
Protein Sequence Length: 389 aa Download sequence
MEKHKCKLCL RRFSNGRALG GHMRSHMMNF PLPRKAHDSP SPNVQLSFEA ESTSSSSSEE 60 EADNNINYKH NVCYGLREKP KRSVRLEDPE FSSVILQDSE SETESSKNTT RYTRLMSEPC 120 NYRSRRTRKF TAFDNWNNGK QVHEREAMMK RMKLSKDSKA ESWVIDHEPL CSSSDVTTEE 180 DVAFCLMMLS RDQEWKRQKY QDQEQEQSIN DQYYEEEYGD EDEDEVERSI EEDSDDESEE 240 EHIYSKNRVR GRRYKCETCN KVFRSYQALG GHRASHKKIK VKISTKINDE LELENNNGGT 300 SSPQIVVEKK IHECPVCFRV FASGQALGGH KRTHVIGLAP TTTTEKQVSS STKHGNNFID 360 LNLPAPVDDD EICQIKSSAV LDAEFLKTH

Sequence ? help Back to Top

Protein Sequence Length: 389 aa Download sequence

MEKHKCKLCL RRFSNGRALG GHMRSHMMNF PLPRKAHDSP SPNVQLSFEA ESTSSSSSEE  60
EADNNINYKH NVCYGLREKP KRSVRLEDPE FSSVILQDSE SETESSKNTT RYTRLMSEPC  120
NYRSRRTRKF TAFDNWNNGK QVHEREAMMK RMKLSKDSKA ESWVIDHEPL CSSSDVTTEE  180
DVAFCLMMLS RDQEWKRQKY QDQEQEQSIN DQYYEEEYGD EDEDEVERSI EEDSDDESEE  240
EHIYSKNRVR GRRYKCETCN KVFRSYQALG GHRASHKKIK VKISTKINDE LELENNNGGT  300
SSPQIVVEKK IHECPVCFRV FASGQALGGH KRTHVIGLAP TTTTEKQVSS STKHGNNFID  360
LNLPAPVDDD EICQIKSSAV LDAEFLKTH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60580.1	6e-55	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIV89446