PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIV89729
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family GATA
Protein Properties Length: 316aa    MW: 34931.8 Da    PI: 10.679
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIV89729genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA60.81.7e-19187220134
      GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
               Cs C+ttkTplWR+gp+g+k+LCnaCG+++rk +
  OIV89729 187 CSDCHTTKTPLWRSGPRGPKSLCNACGIRQRKAR 220
               *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MTLTRKPDRG NMALVHQHDR GNMALVHQHD RGTVALTHEA AHDTDRGTMT LMHKPDRGPQ  60
GLAHGSDQRN LALARIGKII PSSESSWDHS AAAENHDNII GSKVTVWEED RGENLQADAE  120
DGSMKWMPSK MRIMRKMMAS DQTKGSYVAG SSMKKFEHQK QPLSPLGTDN SSNNYPNHST  180
NNTVRVCSDC HTTKTPLWRS GPRGPKSLCN ACGIRQRKAR RAMAAAAAAN GTIVMAAQKS  240
VKGKEKKKSK TECAPPKMKK KRKLQSKSSP QSRNKFTFED LTLRLSKNVA FKQVFPQDEK  300
EAAILLMALS YGLVHG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1217250RKARRAMAAAAAANGTIVMAAQKSVKGKEKKKSK
2246263KKKSKTECAPPKMKKKRK
3259264KKKRKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26150.13e-20GATA family protein