PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV89806

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 448aa MW: 47764.6 Da PI: 8.7124

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV89806	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.5	2.4e-05	63	85	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H OIV89806 63 FVCEICKKGFQRDQNLQLHRRGH 85 89*******************88 PP
2	zf-C2H2	15	6.9e-05	139	161	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC+ C+k + +s+ k H++++ OIV89806 139 WKCERCSKQYAVQSDWKAHMKSC 161 58*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 448 aa Download sequence
MTETNNPSPS SMAASGEATF SSSSLENASQ PPPKKKRSLP GMPDPDAEVI ALSPTTLMAT 60 NRFVCEICKK GFQRDQNLQL HRRGHNLPWK LRQRSANDVR KKVYVCPEPS CVHHHASRAL 120 GDLTGIKKHF SRKHGEKKWK CERCSKQYAV QSDWKAHMKS CGTREYRCDC GTFFSRRDSF 180 LTHRAFCDAL AEEARAQTLT VASPSPPPPP LTPSTTVISP TLSIQSSEIP ENPMRISPPP 240 PPPPKAVTTG NTPSVMASST ISAPSSFSNL MSTMSSTIEP TSLTLSTSSL FDSSSLFQDP 300 HYITATTSSP QPPALSATAL LQKAAQMGAA SSNVSFFHGL ALPTSSSTSS TSAQDHTHTP 360 TMTWNTFINL KQDNLGLGLA SGNNNNAPGF ADVMMGSADP FGGSGQPIMT RDLLGLSIGT 420 GVSSLPSFFT SFGGNFQASE EGGGGVGH

Sequence ? help Back to Top

Protein Sequence Length: 448 aa Download sequence

MTETNNPSPS SMAASGEATF SSSSLENASQ PPPKKKRSLP GMPDPDAEVI ALSPTTLMAT  60
NRFVCEICKK GFQRDQNLQL HRRGHNLPWK LRQRSANDVR KKVYVCPEPS CVHHHASRAL  120
GDLTGIKKHF SRKHGEKKWK CERCSKQYAV QSDWKAHMKS CGTREYRCDC GTFFSRRDSF  180
LTHRAFCDAL AEEARAQTLT VASPSPPPPP LTPSTTVISP TLSIQSSEIP ENPMRISPPP  240
PPPPKAVTTG NTPSVMASST ISAPSSFSNL MSTMSSTIEP TSLTLSTSSL FDSSSLFQDP  300
HYITATTSSP QPPALSATAL LQKAAQMGAA SSNVSFFHGL ALPTSSSTSS TSAQDHTHTP  360
TMTWNTFINL KQDNLGLGLA SGNNNNAPGF ADVMMGSADP FGGSGQPIMT RDLLGLSIGT  420
GVSSLPSFFT SFGGNFQASE EGGGGVGH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	90	102	KLRQRSANDVRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66730.1	1e-107	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIV89806