PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIV89917
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family M-type_MADS
Protein Properties Length: 156aa    MW: 18436.4 Da    PI: 9.7165
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIV89917genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF43.44.3e-141149341
              --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE- CS
    SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifs 41
              i++   r+ +f kR+ gi+KK +EL vLC+++++ ii  
  OIV89917 11 INDINARKASFKKRKRGIFKKVNELTVLCGIQACAIIQN 49
              56667799**************************99965 PP
Sequence ? help Back to Top
Protein Sequence    Length: 156 aa     Download sequence    
MPRDIVKVAY INDINARKAS FKKRKRGIFK KVNELTVLCG IQACAIIQNP FDSQLEVWPN  60
PESANQMIER FQNISFIDES KNMNQESFFI QRISKAQVKL DFQRQENHEK EMNLAMFEFM  120
QTRKLPESLT ITYLKAMNDL IEKHMKEIEY KKATLV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G05860.27e-29M-type_MADS family protein