PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV90081

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

LBD

Protein Properties

Length: 236aa MW: 25563.6 Da PI: 7.2026

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV90081	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	127.5	6.2e-40	37	138	1	101
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100 +C aCk+lrrkC+++C++apyf ++q +++fa+vhk+FGasnv+kll+++pe++r++a++++ yeA+ar+ dPvyG+v+ i++lqqq+++l+ae+a+++++ OIV90081 37 PCGACKFLRRKCVAGCIFAPYFGSDQgAARFAAVHKVFGASNVSKLLSNIPESHRQEAVATVSYEAQARLADPVYGCVSSIFALQQQVASLQAEVAMTQTQ 137 7*********************9989*******************************************************************9987 PP DUF260 101 l 101 l OIV90081 138 L 138 5 PP

Sequence ? help Back to Top
Protein Sequence Length: 236 aa Download sequence
MGDQPQGGYG TSGTRRKGAA LRRAVAAEGQ ETVVVSPCGA CKFLRRKCVA GCIFAPYFGS 60 DQGAARFAAV HKVFGASNVS KLLSNIPESH RQEAVATVSY EAQARLADPV YGCVSSIFAL 120 QQQVASLQAE VAMTQTQLTN SRCAYVTALQ TQQQQLQQPN MNLAMQPAYS NNSSASTNFM 180 DMSNFNHGFD LAMGTAPSSH SLDPLHLSQM SHYEEEDEQE SKIPPIFNHD IGRHSR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G03760.1	2e-66	LBD family protein

Link Out ? help Back to Top
Ensembl	OIV90081