PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV90090

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MYB

Protein Properties

Length: 276aa MW: 31079.5 Da PI: 8.9264

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV90090	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.9	4.2e-17	67	112	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed +l+++v+q+G +W++Ia ++ gR++k+c++rw++ OIV90090 67 RGHWRPTEDAKLKELVAQYGAQNWNSIADHFD-GRSGKSCRLRWFNQ 112 899***************************.*********996 PP
2	Myb_DNA-binding	53.4	6e-17	119	161	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 rg++T++E+ +l+ a+ ++G++ W++I+r ++ gRt++ +k++w+ OIV90090 119 RGAFTEDEETRLIYAHSLYGNK-WALISRLFP-GRTDNAVKNHWH 161 89******************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 276 aa Download sequence
MSSYSFNNGG YGSYGYLSRA SIGSSVVLVP QQPLLTNPFG LMDPPQEVEV EARDSSVAAE 60 KNKLCARGHW RPTEDAKLKE LVAQYGAQNW NSIADHFDGR SGKSCRLRWF NQLDPRIKRG 120 AFTEDEETRL IYAHSLYGNK WALISRLFPG RTDNAVKNHW HVMNARWQRE ESNYYRRNNP 180 YLLRDLSLNN SVASGLTTTS LSGERRVQTE HVGFGKIFGA WNGSGQIGPI RRPNYSDTNS 240 EVSVGTTTNI SFYAENENMV NKSQVHFIDF LGVGDA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G17800.1	1e-62	MYB family protein

Link Out ? help Back to Top
Ensembl	OIV90090